BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B06LP1|AL425981
(846 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1284 1660 0.0
>3x_Contig1284
Length = 6170
Score = 1660 bits (835), Expect = 0.0
Identities = 841/846 (99%)
Strand = Plus / Minus
Query: 1 ttacaaattcaactttaaggatgtagaaaaacgatttgaaagttacttgggtaagaacgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3355 ttacaaattcaactttaaggatgtagaaaaacgatttgaaagttacttgggtaagaacgt 3296
Query: 61 atctgtwatgtattatattaaagttacaatgataagaaaatcggctgatatagtaaaatt 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3295 atctgtaatgtattatattaaagttacaatgataagaaaatcggctgatatagtaaaatt 3236
Query: 121 gaagaagttctggtgtcataggtatgctaatgaatcctctattaaggataatgagggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3235 gaagaagttctggtgtcataggtatgctaatgaatcctctattaaggataatgagggtaa 3176
Query: 181 accaataaaattagatatcggaattgaaaactgtcttcatatagagttcgaatactcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3175 accaataaaattagatatcggaattgaaaactgtcttcatatagagttcgaatactcaaa 3116
Query: 241 ggcacaacacacgttaaaagatgttatagttggaaggatatattttctgcttaccagatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3115 ggcacaacacacgttaaaagatgttatagttggaaggatatattttctgcttaccagatt 3056
Query: 301 aamagtaaaacatatggaattgagtctaatcaaaagggaaacatgcgggacagaaccaaa 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3055 aaaagtaaaacatatggaattgagtctaatcaaaagggaaacatgcgggacagaaccaaa 2996
Query: 361 tcaattgtcagatacgacttcgataagatatgaaatcatggacggctctccagtcaaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2995 tcaattgtcagatacgacttcgataagatatgaaatcatggacggctctccagtcaaggg 2936
Query: 421 agagactattcccatcagattgttccttggaggatatgacctaactccaaacatgacttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2935 agagactattcccatcagattgttccttggaggatatgacctaactccaaacatgacttg 2876
Query: 481 taattacttcaacgtaaaamattatttgagtntagtgataatagacgaagatgggaggrg 540
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 2875 taattacttcaacgtaaaaaattatttgagtttagtgataatagacgaagatgggaggag 2816
Query: 541 gtatttcaaacagacagaaataatgttatacaggactatgtagtttgtgatctttctaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2815 gtatttcaaacagacagaaataatgttatacaggactatgtagtttgtgatctttctaaa 2756
Query: 601 attcttttggttcttgcatgcgctgagacaccatcgacggaattatgattttcttgaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2755 attcttttggttcttgcatgcgctgagacaccatcgacggaattatgattttcttgaaag 2696
Query: 661 aaactgtcattgatgacatcctgaatagacagacgttgttttacatcgaccgaaagtagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2695 aaactgtcattgatgacatcctgaatagacagacgttgttttacatcgaccgaaagtagt 2636
Query: 721 ttcatgcataagtcaatggaaatattaagtgttgttgggttctttgtatacgcctcgaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2635 ttcatgcataagtcaatggaaatattaagtgttgttgggttctttgtatacgcctcgaat 2576
Query: 781 gctacatcgtctatcttagcaattttccacgggaaagcaggtttattcgagttgttgaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2575 gctacatcgtctatcttagcaattttccacgggaaagcaggtttattcgagttgttgaaa 2516
Query: 841 aattca 846
||||||
Sbjct: 2515 aattca 2510
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6701
Number of Sequences: 1807
Number of extensions: 6701
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 846
length of database: 10,358,551
effective HSP length: 16
effective length of query: 830
effective length of database: 10,329,639
effective search space: 8573600370
effective search space used: 8573600370
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)